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Species belonging to selected taxon:

Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST045211
species: Centaurea solstitialis
source: microPC, original name: miR530

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCATTTGCACCTGCACCT

miRNA*
GTGCAGGACAAGTGCA

mismatches: 2
bulges: 1

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pre-miRNA
TGCATTTGCACCTGCACCTTTCTACCTTTCTTCTCCATCTTCATCTTCTTCACCACCATCATAAGACAATGTGTGTGTGTGTGTGTGTGTGTGAGTAGGT
GGAGAGGTTAAGAAGAAAAGAAGGGTGCAGGACAAGTGCA


dot-bracket secondary structure
.(((((((..(((((((((((((...((((((((((.(((((((((..(((((((((((((((..(((.....))).)))).))).))).))))).))))
)))))))...))))))))))))))))))))).))))))).



SIMILARITIES
miRBase ptc-MIR530a: 0.0004

PMRD ptc-miRf11026-akr: 0.0004

microPC miR1030: 2e-33
UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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